J5_7PIB_005
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUACU*AGUUUG*CG*CG*CGGAUAAAA
- Length
- 25 nucleotides
- Bulged bases
- 7PIB|1|3|U|2083, 7PIB|1|3|G|2436, 7PIB|1|3|G|2437, 7PIB|1|3|A|2438, 7PIB|1|3|U|2439, 7PIB|1|3|A|2440, 7PIB|1|3|A|2441, 7PIB|1|3|A|2442
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIB|1|3|U|2081
7PIB|1|3|U|2082
7PIB|1|3|U|2083
7PIB|1|3|A|2084
7PIB|1|3|C|2085
7PIB|1|3|U|2086
*
7PIB|1|3|A|2249
7PIB|1|3|G|2250
7PIB|1|3|U|2251
7PIB|1|3|U|2252
7PIB|1|3|U|2253
7PIB|1|3|G|2254
*
7PIB|1|3|C|2266
7PIB|1|3|G|2267
*
7PIB|1|3|C|2289
7PIB|1|3|G|2290
*
7PIB|1|3|C|2435
7PIB|1|3|G|2436
7PIB|1|3|G|2437
7PIB|1|3|A|2438
7PIB|1|3|U|2439
7PIB|1|3|A|2440
7PIB|1|3|A|2441
7PIB|1|3|A|2442
7PIB|1|3|A|2443
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain 8
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L2
- Chain k
- 50S ribosomal protein L15
- Chain u
- 50S ribosomal protein L27
- Chain v
- 50S ribosomal protein L28
- Chain z
- 50S ribosomal protein L33 1
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