J5_7PIR_004
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- ACUCUGCAAAUUAA*UG*CC*GUGAAGAAC*GACUGU
- Length
- 33 nucleotides
- Bulged bases
- 7PIR|1|3|A|1715, 7PIR|1|3|A|1770, 7PIR|1|3|G|1999
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIR|1|3|A|1703
7PIR|1|3|C|1704
7PIR|1|3|U|1705
7PIR|1|3|C|1706
7PIR|1|3|U|1707
7PIR|1|3|G|1708
7PIR|1|3|C|1709
7PIR|1|3|A|1710
7PIR|1|3|A|1711
7PIR|1|3|A|1712
7PIR|1|3|U|1713
7PIR|1|3|U|1714
7PIR|1|3|A|1715
7PIR|1|3|A|1716
*
7PIR|1|3|U|1740
7PIR|1|3|G|1741
*
7PIR|1|3|C|1758
7PIR|1|3|C|1759
*
7PIR|1|3|G|1763
7PIR|1|3|U|1764
7PIR|1|3|G|1765
7PIR|1|3|A|1766
7PIR|1|3|A|1767
7PIR|1|3|G|1768
7PIR|1|3|A|1769
7PIR|1|3|A|1770
7PIR|1|3|C|1771
*
7PIR|1|3|G|1995
7PIR|1|3|A|1996
7PIR|1|3|C|1997
7PIR|1|3|U|1998
7PIR|1|3|G|1999
7PIR|1|3|U|2000
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L14
- Chain o
- 50S ribosomal protein L19
Coloring options: