J5_7PIR_011
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- GCUGG*CGUG*CUUUUA*UGAAUAAG*CAAGC
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIR|1|5|G|36
7PIR|1|5|C|37
7PIR|1|5|U|38
7PIR|1|5|G|39
7PIR|1|5|G|40
*
7PIR|1|5|C|399
7PIR|1|5|G|400
7PIR|1|5|U|401
7PIR|1|5|G|402
*
7PIR|1|5|C|433
7PIR|1|5|U|434
7PIR|1|5|U|435
7PIR|1|5|U|436
7PIR|1|5|U|437
7PIR|1|5|A|438
*
7PIR|1|5|U|491
7PIR|1|5|G|492
7PIR|1|5|A|493
7PIR|1|5|A|494
7PIR|1|5|U|495
7PIR|1|5|A|496
7PIR|1|5|A|497
7PIR|1|5|G|498
*
7PIR|1|5|C|543
7PIR|1|5|A|544
7PIR|1|5|A|545
7PIR|1|5|G|546
7PIR|1|5|C|547
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain K
- 30S ribosomal protein S12
Coloring options: