J5_7PIR_012
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CCUAAUACAUGCAAG*CGAACGGG*CAA*UAC*GGCAGCAGUAGG
- Length
- 41 nucleotides
- Bulged bases
- 7PIR|1|5|C|49, 7PIR|1|5|A|51, 7PIR|1|5|A|61, 7PIR|1|5|A|93, 7PIR|1|5|A|94
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIR|1|5|C|48
7PIR|1|5|C|49
7PIR|1|5|U|50
7PIR|1|5|A|51
7PIR|1|5|A|52
7PIR|1|5|U|53
7PIR|1|5|A|54
7PIR|1|5|C|55
7PIR|1|5|A|56
7PIR|1|5|U|57
7PIR|1|5|G|58
7PIR|1|5|C|59
7PIR|1|5|A|60
7PIR|1|5|A|61
7PIR|1|5|G|62
*
7PIR|1|5|C|91
7PIR|1|5|G|92
7PIR|1|5|A|93
7PIR|1|5|A|94
7PIR|1|5|C|95
7PIR|1|5|G|96
7PIR|1|5|G|97
7PIR|1|5|G|98
*
7PIR|1|5|C|310
7PIR|1|5|A|311
7PIR|1|5|A|312
*
7PIR|1|5|U|333
7PIR|1|5|A|334
7PIR|1|5|C|335
*
7PIR|1|5|G|346
7PIR|1|5|G|347
7PIR|1|5|C|348
7PIR|1|5|A|349
7PIR|1|5|G|350
7PIR|1|5|C|351
7PIR|1|5|A|352
7PIR|1|5|G|353
7PIR|1|5|U|354
7PIR|1|5|A|355
7PIR|1|5|G|356
7PIR|1|5|G|357
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S16
- Chain S
- 30S ribosomal protein S20
- Chain j
- 50S ribosomal protein L14
Coloring options: