J5_7PWO_001
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGG*CGACGAAG*CGAACG*CG*CGC
- Length
- 22 nucleotides
- Bulged bases
- 7PWO|1|42|C|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PWO|1|1|G|19
7PWO|1|1|G|20
7PWO|1|1|G|21
*
7PWO|1|42|C|36
7PWO|1|42|G|37
7PWO|1|42|A|38
7PWO|1|42|C|39
7PWO|1|42|G|40
7PWO|1|42|A|41
7PWO|1|42|A|42
7PWO|1|42|G|43
*
7PWO|1|42|C|102
7PWO|1|42|G|103
7PWO|1|42|A|104
7PWO|1|42|A|105
7PWO|1|42|C|106
7PWO|1|42|G|107
*
7PWO|1|42|C|113
7PWO|1|42|G|114
*
7PWO|1|42|C|121
7PWO|1|42|G|122
7PWO|1|42|C|123
Current chains
- Chain 1
- rRNA 28S
- Chain 42
- rRNA 5.8S
Nearby chains
- Chain N2
- Ribosomal protein L15
- Chain X2
- Ribosomal protein L23A
- Chain h2
- Ribosomal protein L35
- Chain j2
- Ribosomal protein L37
Coloring options: