J5_7QH7_003
3D structure
- PDB id
- 7QH7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- AAGAC*GCAAU*GUUUACU*GAGUUCAG*CGGUUU
- Length
- 31 nucleotides
- Bulged bases
- 7QH7|1|A|C|2944, 7QH7|1|A|U|2979, 7QH7|1|A|U|2980, 7QH7|1|A|A|2981, 7QH7|1|A|C|2982, 7QH7|1|A|U|3072, 7QH7|1|A|U|3096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QH7|1|A|A|2720
7QH7|1|A|A|2723
7QH7|1|A|G|2724
7QH7|1|A|A|2725
7QH7|1|A|C|2726
*
7QH7|1|A|G|2934
7QH7|1|A|C|2944
7QH7|1|A|A|2945
7QH7|1|A|A|2946
7QH7|1|A|U|2947
*
7QH7|1|A|G|2977
7QH7|1|A|U|2978
7QH7|1|A|U|2979
7QH7|1|A|U|2980
7QH7|1|A|A|2981
7QH7|1|A|C|2982
7QH7|1|A|U|2994
*
7QH7|1|A|G|3068
7QH7|1|A|A|3069
7QH7|1|A|G|3070
7QH7|1|A|U|3071
7QH7|1|A|U|3072
7QH7|1|A|C|3073
7QH7|1|A|A|3074
7QH7|1|A|G|3075
*
7QH7|1|A|C|3093
7QH7|1|A|G|3094
7QH7|1|A|G|3095
7QH7|1|A|U|3096
7QH7|1|A|U|3097
7QH7|1|A|U|3098
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: