J5_7QIZ_003
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CGAG*CGUAA*UGAUUG*CGA*UGUGAG
- Length
- 24 nucleotides
- Bulged bases
- 7QIZ|1|2|U|794, 7QIZ|1|2|G|795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|2|C|686
7QIZ|1|2|G|687
7QIZ|1|2|A|688
7QIZ|1|2|G|689
*
7QIZ|1|2|C|715
7QIZ|1|2|G|716
7QIZ|1|2|U|717
7QIZ|1|2|A|718
7QIZ|1|2|A|719
*
7QIZ|1|2|U|726
7QIZ|1|2|G|727
7QIZ|1|2|A|728
7QIZ|1|2|U|729
7QIZ|1|2|U|730
7QIZ|1|2|G|731
*
7QIZ|1|2|C|759
7QIZ|1|2|G|760
7QIZ|1|2|A|761
*
7QIZ|1|2|U|792
7QIZ|1|2|G|793
7QIZ|1|2|U|794
7QIZ|1|2|G|795
7QIZ|1|2|A|796
7QIZ|1|2|G|797
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain F
- Ribos_L4_asso_C domain-containing protein
- Chain N
- 60S ribosomal protein L13
- Chain S
- Ribosomal_L18e/L15P domain-containing protein
- Chain V
- 60S ribosomal protein eL21
- Chain c
- Ribosomal_L18e/L15P domain-containing protein
- Chain d
- 60S ribosomal protein L29
- Chain k
- 60S ribosomal protein L36
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