J5_7QV3_009
3D structure
- PDB id
- 7QV3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.14 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7QV3|1|a|A|62, 7QV3|1|a|A|107, 7QV3|1|a|C|360
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7QV3_009 not in the Motif Atlas
- Homologous match to J5_5J7L_003
- Geometric discrepancy: 0.1251
- The information below is about J5_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_59910.6
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7QV3|1|a|C|60
7QV3|1|a|A|61
7QV3|1|a|A|62
7QV3|1|a|G|63
*
7QV3|1|a|C|104
7QV3|1|a|G|105
7QV3|1|a|G|106
7QV3|1|a|A|107
7QV3|1|a|C|108
7QV3|1|a|G|109
7QV3|1|a|G|110
7QV3|1|a|G|111
*
7QV3|1|a|C|322
7QV3|1|a|A|323
7QV3|1|a|C|324
*
7QV3|1|a|G|345
7QV3|1|a|A|346
7QV3|1|a|C|347
*
7QV3|1|a|G|358
7QV3|1|a|G|359
7QV3|1|a|C|360
7QV3|1|a|A|361
7QV3|1|a|G|362
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
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