J5_7RYF_002
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CAG*CGUAC*GGG*CG*CG
- Length
- 15 nucleotides
- Bulged bases
- 7RYF|1|A|A|531, 7RYF|1|A|U|560
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7RYF_002 not in the Motif Atlas
- Homologous match to J5_5J7L_014
- Geometric discrepancy: 0.101
- The information below is about J5_5J7L_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_43153.5
- Basepair signature
- cWW-cWW-cWW-F-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7RYF|1|A|C|530
7RYF|1|A|A|531
7RYF|1|A|G|532
*
7RYF|1|A|C|558
7RYF|1|A|G|559
7RYF|1|A|U|560
7RYF|1|A|A|561
7RYF|1|A|C|562
*
7RYF|1|A|G|575
7RYF|1|A|G|576
7RYF|1|A|G|577
*
7RYF|1|A|C|1256
7RYF|1|A|G|1257
*
7RYF|1|A|C|2013
7RYF|1|A|G|2014
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L20
- Chain Q
- 50S ribosomal protein L21
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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