J5_7S0S_002

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUAAAC*GGGUUGUG*CGAGUAG*UGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

7S0S|1|C|U|318, 7S0S|1|C|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S0S|1|C|C|269
7S0S|1|C|U|270
7S0S|1|C|A|271
7S0S|1|C|A|272
7S0S|1|C|A|273
7S0S|1|C|C|274
*
7S0S|1|C|G|312
7S0S|1|C|G|313
7S0S|1|C|G|314
7S0S|1|C|U|315
7S0S|1|C|U|316
7S0S|1|C|G|317
7S0S|1|C|U|318
7S0S|1|C|G|319
*
7S0S|1|C|C|457
7S0S|1|C|G|458
7S0S|1|C|A|459
7S0S|1|C|G|460
7S0S|1|C|U|461
7S0S|1|C|A|462
7S0S|1|C|G|463
*
7S0S|1|C|U|487
7S0S|1|C|G|488
7S0S|1|C|A|489
7S0S|1|C|A|490
7S0S|1|C|U|491
7S0S|1|C|C|492
7S0S|1|C|U|493
7S0S|1|C|G|494
*
7S0S|1|C|U|509
7S0S|1|C|A|510
7S0S|1|C|A|511
7S0S|1|C|G|512

Current chains

Chain C

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L9

Chain Z

50S ribosomal protein L28