J5_7S0S_005

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S0S|1|C|C|694
7S0S|1|C|G|695
7S0S|1|C|A|696
7S0S|1|C|G|697
*
7S0S|1|C|C|718
7S0S|1|C|G|719
7S0S|1|C|C|720
7S0S|1|C|A|721
7S0S|1|C|G|722
*
7S0S|1|C|C|729
7S0S|1|C|G|730
7S0S|1|C|A|731
7S0S|1|C|G|732
*
7S0S|1|C|C|744
7S0S|1|C|G|745
7S0S|1|C|U|746
7S0S|1|C|A|747
7S0S|1|C|U|748
7S0S|1|C|C|749
*
7S0S|1|C|G|766
7S0S|1|C|U|767
7S0S|1|C|G|768
7S0S|1|C|U|769
7S0S|1|C|A|770
7S0S|1|C|G|771

Current chains

Chain C

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L4

Chain N

50S ribosomal protein L15

Chain f

50S ribosomal protein L35