J5_7TOS_008
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7TOS|1|23S|A|2062, 7TOS|1|23S|A|2448, 7TOS|1|23S|U|2449, 7TOS|1|23S|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOS|1|23S|G|2057
7TOS|1|23S|A|2058
7TOS|1|23S|A|2059
7TOS|1|23S|A|2060
7TOS|1|23S|G|2061
7TOS|1|23S|A|2062
7TOS|1|23S|C|2063
7TOS|1|23S|C|2064
*
7TOS|1|23S|G|2446
7TOS|1|23S|G|2447
7TOS|1|23S|A|2448
7TOS|1|23S|U|2449
7TOS|1|23S|A|2450
7TOS|1|23S|A|2451
7TOS|1|23S|C|2452
7TOS|1|23S|A|2453
*
7TOS|1|23S|U|2500
7TOS|1|23S|C|2501
7TOS|1|23S|G|2502
7TOS|1|23S|A|2503
7TOS|1|23S|U|2504
7TOS|1|23S|G|2505
7TOS|1|23S|U|2506
7TOS|1|23S|C|2507
*
7TOS|1|23S|G|2582
7TOS|1|23S|G|2583
7TOS|1|23S|U|2584
7TOS|1|23S|U|2585
7TOS|1|23S|U|2586
7TOS|1|23S|A|2587
7TOS|1|23S|G|2588
*
7TOS|1|23S|C|2606
7TOS|1|23S|G|2607
7TOS|1|23S|G|2608
7TOS|1|23S|U|2609
7TOS|1|23S|C|2610
7TOS|1|23S|C|2611
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L02
- 50S ribosomal protein L2
- Chain L03
- 50S ribosomal protein L3
- Chain L04
- 50S ribosomal protein L4
- Chain L15
- 50S ribosomal protein L15
- Chain L16
- 50S ribosomal protein L16
- Chain L22
- 50S ribosomal protein L22
- Chain L32
- 50S ribosomal protein L32
- Chain PR
- PR20, ALS/FTD dipeptide repeat protein
Coloring options: