J5_7UNU_005
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCG(2MA)UGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7UNU|1|A|A|2049, 7UNU|1|A|A|2435, 7UNU|1|A|U|2436, 7UNU|1|A|U|2493, 7UNU|1|A|U|2596
- QA status
- Modified nucleotides: 2MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UNU|1|A|G|2044
7UNU|1|A|A|2045
7UNU|1|A|A|2046
7UNU|1|A|A|2047
7UNU|1|A|G|2048
7UNU|1|A|A|2049
7UNU|1|A|C|2050
7UNU|1|A|C|2051
*
7UNU|1|A|G|2433
7UNU|1|A|G|2434
7UNU|1|A|A|2435
7UNU|1|A|U|2436
7UNU|1|A|A|2437
7UNU|1|A|A|2438
7UNU|1|A|C|2439
7UNU|1|A|A|2440
*
7UNU|1|A|U|2487
7UNU|1|A|C|2488
7UNU|1|A|G|2489
7UNU|1|A|2MA|2490
7UNU|1|A|U|2491
7UNU|1|A|G|2492
7UNU|1|A|U|2493
7UNU|1|A|C|2494
*
7UNU|1|A|G|2569
7UNU|1|A|G|2570
7UNU|1|A|U|2571
7UNU|1|A|U|2572
7UNU|1|A|U|2573
7UNU|1|A|A|2574
7UNU|1|A|G|2575
*
7UNU|1|A|C|2593
7UNU|1|A|G|2594
7UNU|1|A|G|2595
7UNU|1|A|U|2596
7UNU|1|A|C|2597
7UNU|1|A|C|2598
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain N
- 50S ribosomal protein L15
- Chain O
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L22
- Chain v
- Transfer RNA; tRNA
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