J5_7UNV_007
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGG*CGUG*CUUUA*UAAG*CAAG
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7UNV_007 not in the Motif Atlas
- Homologous match to J5_5J7L_001
- Geometric discrepancy: 0.0654
- The information below is about J5_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_92941.1
- Basepair signature
- cWW-F-cHW-F-tSS-F-cWW-cWW-F-F-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7UNV|1|a|C|36
7UNV|1|a|U|37
7UNV|1|a|G|38
7UNV|1|a|G|39
*
7UNV|1|a|C|397
7UNV|1|a|G|398
7UNV|1|a|U|399
7UNV|1|a|G|400
*
7UNV|1|a|C|430
7UNV|1|a|U|431
7UNV|1|a|U|432
7UNV|1|a|U|433
7UNV|1|a|A|434
*
7UNV|1|a|U|491
7UNV|1|a|A|492
7UNV|1|a|A|493
7UNV|1|a|G|494
*
7UNV|1|a|C|539
7UNV|1|a|A|540
7UNV|1|a|A|541
7UNV|1|a|G|542
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
- Chain x
- Translation initiation factor IF-2
Coloring options: