J5_7UPH_008
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- ACUAGGCAAAAUGG*CGC*GUC*GAUACCAGC*GGCUGU
- Length
- 35 nucleotides
- Bulged bases
- 7UPH|1|I|U|3252, 7UPH|1|I|G|3257, 7UPH|1|I|G|3486
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UPH|1|I|A|3163
7UPH|1|I|C|3164
7UPH|1|I|U|3165
7UPH|1|I|A|3166
7UPH|1|I|G|3167
7UPH|1|I|G|3168
7UPH|1|I|C|3169
7UPH|1|I|A|3170
7UPH|1|I|A|3171
7UPH|1|I|A|3172
7UPH|1|I|A|3173
7UPH|1|I|U|3174
7UPH|1|I|G|3175
7UPH|1|I|G|3176
*
7UPH|1|I|C|3200
7UPH|1|I|G|3201
7UPH|1|I|C|3202
*
7UPH|1|I|G|3244
7UPH|1|I|U|3245
7UPH|1|I|C|3246
*
7UPH|1|I|G|3250
7UPH|1|I|A|3251
7UPH|1|I|U|3252
7UPH|1|I|A|3253
7UPH|1|I|C|3254
7UPH|1|I|C|3255
7UPH|1|I|A|3256
7UPH|1|I|G|3257
7UPH|1|I|C|3258
*
7UPH|1|I|G|3482
7UPH|1|I|G|3483
7UPH|1|I|C|3484
7UPH|1|I|U|3485
7UPH|1|I|G|3486
7UPH|1|I|U|3487
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain S
- 50S ribosomal protein L14
- Chain o
- 50S ribosomal protein L19
Coloring options: