J5_7UPH_010
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- UUUA*UUUG*CUCC*GGAG*CGGAUAAAA
- Length
- 25 nucleotides
- Bulged bases
- 7UPH|1|I|U|3570, 7UPH|1|I|G|3922, 7UPH|1|I|G|3923, 7UPH|1|I|A|3924, 7UPH|1|I|U|3925, 7UPH|1|I|A|3928
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UPH|1|I|U|3568
7UPH|1|I|U|3569
7UPH|1|I|U|3570
7UPH|1|I|A|3571
*
7UPH|1|I|U|3737
7UPH|1|I|U|3738
7UPH|1|I|U|3739
7UPH|1|I|G|3740
*
7UPH|1|I|C|3752
7UPH|1|I|U|3753
7UPH|1|I|C|3754
7UPH|1|I|C|3755
*
7UPH|1|I|G|3773
7UPH|1|I|G|3774
7UPH|1|I|A|3775
7UPH|1|I|G|3776
*
7UPH|1|I|C|3921
7UPH|1|I|G|3922
7UPH|1|I|G|3923
7UPH|1|I|A|3924
7UPH|1|I|U|3925
7UPH|1|I|A|3926
7UPH|1|I|A|3927
7UPH|1|I|A|3928
7UPH|1|I|A|3929
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain T
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L16
- Chain j
- 50S ribosomal protein L33
- Chain v
- 50S ribosomal protein L27
- Chain w
- 50S ribosomal protein L28
Coloring options: