J5_7UPH_011

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CAG*CUAU*AGG

Length

24 nucleotides

Bulged bases

7UPH|1|I|U|1550

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|C|1547
7UPH|1|I|G|1548
7UPH|1|I|A|1549
7UPH|1|I|U|1550
7UPH|1|I|G|1551
7UPH|1|I|A|1552
7UPH|1|I|A|1553
7UPH|1|I|G|1554
*
7UPH|1|I|C|1616
7UPH|1|I|G|1617
7UPH|1|I|A|1618
7UPH|1|I|A|1619
7UPH|1|I|U|1620
7UPH|1|I|G|1621
*
7UPH|1|I|C|1630
7UPH|1|I|A|1631
7UPH|1|I|G|1632
*
7UPH|1|I|C|1647
7UPH|1|I|U|1648
7UPH|1|I|A|1649
7UPH|1|I|U|1650
*
7UPH|1|I|A|1676
7UPH|1|I|G|1677
7UPH|1|I|G|1678

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain k

50S ribosomal protein L34