J5_7Z20_005
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 7Z20|1|b|A|2447, 7Z20|1|b|U|2448, 7Z20|1|b|U|2608
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Z20|1|b|G|2056
7Z20|1|b|A|2057
7Z20|1|b|A|2058
7Z20|1|b|A|2059
7Z20|1|b|G|2060
7Z20|1|b|A|2061
7Z20|1|b|C|2062
7Z20|1|b|C|2063
*
7Z20|1|b|G|2445
7Z20|1|b|G|2446
7Z20|1|b|A|2447
7Z20|1|b|U|2448
7Z20|1|b|A|2449
7Z20|1|b|A|2450
7Z20|1|b|C|2451
7Z20|1|b|A|2452
*
7Z20|1|b|U|2499
7Z20|1|b|C|2500
7Z20|1|b|G|2501
7Z20|1|b|A|2502
7Z20|1|b|U|2503
7Z20|1|b|G|2504
7Z20|1|b|U|2505
*
7Z20|1|b|G|2582
7Z20|1|b|U|2583
7Z20|1|b|U|2584
7Z20|1|b|U|2585
7Z20|1|b|A|2586
7Z20|1|b|G|2587
*
7Z20|1|b|C|2605
7Z20|1|b|G|2606
7Z20|1|b|G|2607
7Z20|1|b|U|2608
7Z20|1|b|C|2609
7Z20|1|b|C|2610
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L2
- Chain d
- 50S ribosomal protein L3
- Chain e
- 50S ribosomal protein L4
- Chain l
- 50S ribosomal protein L15
- Chain m
- 50S ribosomal protein L16
- Chain s
- 50S ribosomal protein L22
- Chain v
- Transfer RNA; tRNA
- Chain y
- 50S ribosomal protein L27
- Chain z
- Gelation factor
Coloring options: