J5_7ZRS_007
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GC*GCAGAUC
- Length
- 23 nucleotides
- Bulged bases
- 7ZRS|1|5|U|1437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZRS_007 not in the Motif Atlas
- Homologous match to J5_8C3A_002
- Geometric discrepancy: 0.0487
- The information below is about J5_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZRS|1|5|G|659
7ZRS|1|5|G|660
7ZRS|1|5|A|661
7ZRS|1|5|G|662
7ZRS|1|5|U|663
7ZRS|1|5|C|664
*
7ZRS|1|5|G|800
7ZRS|1|5|G|801
7ZRS|1|5|A|802
7ZRS|1|5|C|803
*
7ZRS|1|5|G|942
7ZRS|1|5|U|943
7ZRS|1|5|U|944
7ZRS|1|5|C|945
*
7ZRS|1|5|G|1376
7ZRS|1|5|C|1377
*
7ZRS|1|5|G|1432
7ZRS|1|5|C|1433
7ZRS|1|5|A|1434
7ZRS|1|5|G|1435
7ZRS|1|5|A|1436
7ZRS|1|5|U|1437
7ZRS|1|5|C|1438
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BK
- 60S ribosomal protein L13-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain BZ
- 60S ribosomal protein L28
- Chain Bd
- RPL32 isoform 1
Coloring options: