J5_7ZTA_003
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7ZTA|1|16S1|A|60, 7ZTA|1|16S1|A|109, 7ZTA|1|16S1|C|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZTA_003 not in the Motif Atlas
- Homologous match to J5_5J7L_003
- Geometric discrepancy: 0.1149
- The information below is about J5_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_59910.6
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7ZTA|1|16S1|C|58
7ZTA|1|16S1|A|59
7ZTA|1|16S1|A|60
7ZTA|1|16S1|G|61
*
7ZTA|1|16S1|C|106
7ZTA|1|16S1|G|107
7ZTA|1|16S1|G|108
7ZTA|1|16S1|A|109
7ZTA|1|16S1|C|110
7ZTA|1|16S1|G|111
7ZTA|1|16S1|G|112
7ZTA|1|16S1|G|113
*
7ZTA|1|16S1|C|314
7ZTA|1|16S1|A|315
7ZTA|1|16S1|C|316
*
7ZTA|1|16S1|G|337
7ZTA|1|16S1|A|338
7ZTA|1|16S1|C|339
*
7ZTA|1|16S1|G|350
7ZTA|1|16S1|G|351
7ZTA|1|16S1|C|352
7ZTA|1|16S1|A|353
7ZTA|1|16S1|G|354
Current chains
- Chain 16S1
- 16S ribosomal RNA
Nearby chains
- Chain L141
- 50S ribosomal protein L14
- Chain L191
- 50S ribosomal protein L19
- Chain S161
- 30S ribosomal protein S16
- Chain S201
- 30S ribosomal protein S20
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