J5_7ZTA_008
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAAGACC*GGA(H2U)AACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7ZTA|1|23S1|A|2062, 7ZTA|1|23S1|A|2448, 7ZTA|1|23S1|U|2609
- QA status
- Modified nucleotides: H2U, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZTA|1|23S1|G|2057
7ZTA|1|23S1|A|2058
7ZTA|1|23S1|A|2059
7ZTA|1|23S1|A|2060
7ZTA|1|23S1|G|2061
7ZTA|1|23S1|A|2062
7ZTA|1|23S1|C|2063
7ZTA|1|23S1|C|2064
*
7ZTA|1|23S1|G|2446
7ZTA|1|23S1|G|2447
7ZTA|1|23S1|A|2448
7ZTA|1|23S1|H2U|2449
7ZTA|1|23S1|A|2450
7ZTA|1|23S1|A|2451
7ZTA|1|23S1|C|2452
7ZTA|1|23S1|A|2453
*
7ZTA|1|23S1|U|2500
7ZTA|1|23S1|C|2501
7ZTA|1|23S1|G|2502
7ZTA|1|23S1|2MA|2503
7ZTA|1|23S1|PSU|2504
7ZTA|1|23S1|G|2505
7ZTA|1|23S1|U|2506
7ZTA|1|23S1|C|2507
*
7ZTA|1|23S1|G|2582
7ZTA|1|23S1|G|2583
7ZTA|1|23S1|U|2584
7ZTA|1|23S1|U|2585
7ZTA|1|23S1|U|2586
7ZTA|1|23S1|A|2587
7ZTA|1|23S1|G|2588
*
7ZTA|1|23S1|C|2606
7ZTA|1|23S1|G|2607
7ZTA|1|23S1|G|2608
7ZTA|1|23S1|U|2609
7ZTA|1|23S1|C|2610
7ZTA|1|23S1|C|2611
Current chains
- Chain 23S1
- 23S ribosomal RNA
Nearby chains
- Chain L021
- 50S ribosomal protein L2
- Chain L031
- 50S ribosomal protein L3
- Chain L041
- 50S ribosomal protein L4
- Chain L151
- 50S ribosomal protein L15
- Chain L221
- 50S ribosomal protein L22
- Chain L271
- 50S ribosomal protein L27
- Chain L321
- 50S ribosomal protein L32
- Chain PQK1
- MAAAPQK nascent peptide
- Chain PTR1
- Transfer RNA; tRNA
Coloring options: