J5_7ZUW_002

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUUGUCUCAAA*UGACAAUAAAUAAC*GGAAUG*CAAU*AUAG

Length

39 nucleotides

Bulged bases

7ZUW|1|2|A|544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZUW|1|2|C|31
7ZUW|1|2|U|32
7ZUW|1|2|U|33
7ZUW|1|2|G|34
7ZUW|1|2|U|35
7ZUW|1|2|C|36
7ZUW|1|2|U|37
7ZUW|1|2|C|38
7ZUW|1|2|A|39
7ZUW|1|2|A|40
7ZUW|1|2|A|41
*
7ZUW|1|2|U|466
7ZUW|1|2|G|467
7ZUW|1|2|A|468
7ZUW|1|2|C|469
7ZUW|1|2|A|470
7ZUW|1|2|A|471
7ZUW|1|2|U|472
7ZUW|1|2|A|473
7ZUW|1|2|A|474
7ZUW|1|2|A|475
7ZUW|1|2|U|476
7ZUW|1|2|A|477
7ZUW|1|2|A|478
7ZUW|1|2|C|479
*
7ZUW|1|2|G|509
7ZUW|1|2|G|510
7ZUW|1|2|A|511
7ZUW|1|2|A|512
7ZUW|1|2|U|513
7ZUW|1|2|G|514
*
7ZUW|1|2|C|543
7ZUW|1|2|A|544
7ZUW|1|2|A|545
7ZUW|1|2|U|546
*
7ZUW|1|2|A|592
7ZUW|1|2|U|593
7ZUW|1|2|A|594
7ZUW|1|2|G|595

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4-A

Chain AJ

40S ribosomal protein S9-A

Chain AX

40S ribosomal protein S23-A

Chain AY

40S ribosomal protein S24-A

Chain Ae

40S ribosomal protein S30-A