J5_7ZW0_006
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGG*CGAUGAAG*UGAACG*CG*CAU
- Length
- 22 nucleotides
- Bulged bases
- 7ZW0|1|LD|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZW0_006 not in the Motif Atlas
- Homologous match to J5_8P9A_010
- Geometric discrepancy: 0.0453
- The information below is about J5_8P9A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_01737.2
- Basepair signature
- cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7ZW0|1|LA|A|20
7ZW0|1|LA|G|21
7ZW0|1|LA|G|22
*
7ZW0|1|LD|C|35
7ZW0|1|LD|G|36
7ZW0|1|LD|A|37
7ZW0|1|LD|U|38
7ZW0|1|LD|G|39
7ZW0|1|LD|A|40
7ZW0|1|LD|A|41
7ZW0|1|LD|G|42
*
7ZW0|1|LD|U|102
7ZW0|1|LD|G|103
7ZW0|1|LD|A|104
7ZW0|1|LD|A|105
7ZW0|1|LD|C|106
7ZW0|1|LD|G|107
*
7ZW0|1|LD|C|115
7ZW0|1|LD|G|116
*
7ZW0|1|LD|C|137
7ZW0|1|LD|A|138
7ZW0|1|LD|U|139
Current chains
- Chain LA
- 25S ribosomal RNA (RDN25-1)
- Chain LD
- 5.8S ribosomal RNA (RDN58-1)
Nearby chains
- Chain LQ
- 60S ribosomal protein L15-A
- Chain La
- 60S ribosomal protein L25
- Chain Lk
- 60S ribosomal protein L35-A
- Chain Lm
- 60S ribosomal protein L37-A
- Chain Lo
- 60S ribosomal protein L39
Coloring options: