J5_8CRX_004

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGAUGAAG*CGAAUG*UGG*UGGC*GUG

Length

24 nucleotides

Bulged bases

8CRX|1|a|U|49

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CRX|1|a|C|46
8CRX|1|a|G|47
8CRX|1|a|A|48
8CRX|1|a|U|49
8CRX|1|a|G|50
8CRX|1|a|A|51
8CRX|1|a|A|52
8CRX|1|a|G|53
*
8CRX|1|a|C|115
8CRX|1|a|G|116
8CRX|1|a|A|117
8CRX|1|a|A|118
8CRX|1|a|U|119
8CRX|1|a|G|120
*
8CRX|1|a|U|129
8CRX|1|a|G|130
8CRX|1|a|G|131
*
8CRX|1|a|U|153
8CRX|1|a|G|154
8CRX|1|a|G|155
8CRX|1|a|C|156
*
8CRX|1|a|G|183
8CRX|1|a|U|184
8CRX|1|a|G|185

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain s

50S ribosomal protein L23