J5_8FL0_001

3D structure

PDB id

8FL0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State H)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CG*UAAGG*CUUGAUC*GAC*GGG

Length

20 nucleotides

Bulged bases

8FL0|1|L3|G|4291, 8FL0|1|L3|A|4292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL0|1|L3|C|4199
8FL0|1|L3|G|4200
*
8FL0|1|L3|U|4232
8FL0|1|L3|A|4233
8FL0|1|L3|A|4234
8FL0|1|L3|G|4235
8FL0|1|L3|G|4236
*
8FL0|1|L3|C|4288
8FL0|1|L3|U|4289
8FL0|1|L3|U|4290
8FL0|1|L3|G|4291
8FL0|1|L3|A|4292
8FL0|1|L3|U|4293
8FL0|1|L3|C|4294
*
8FL0|1|L3|G|4316
8FL0|1|L3|A|4317
8FL0|1|L3|C|4318
*
8FL0|1|L3|G|4329
8FL0|1|L3|G|4330
8FL0|1|L3|G|4331

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NC

Nucleolar GTP-binding protein 2

Chain ND

Ribosome production factor 2 homolog

Chain NF

Ribosome biogenesis protein NSA2 homolog

Chain SB

60S ribosomal protein L5

Chain ST

Ribosome biogenesis regulatory protein homolog