J5_8FRU_003
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CGAG*CGGAG*CGAGAC*GG*CCGAG
- Length
- 22 nucleotides
- Bulged bases
- 8FRU|1|1|A|459, 8FRU|1|1|G|500
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FRU|1|1|C|421
8FRU|1|1|G|422
8FRU|1|1|A|423
8FRU|1|1|G|424
*
8FRU|1|1|C|444
8FRU|1|1|G|445
8FRU|1|1|G|446
8FRU|1|1|A|447
8FRU|1|1|G|448
*
8FRU|1|1|C|455
8FRU|1|1|G|456
8FRU|1|1|A|457
8FRU|1|1|G|458
8FRU|1|1|A|459
8FRU|1|1|C|460
*
8FRU|1|1|G|467
8FRU|1|1|G|468
*
8FRU|1|1|C|498
8FRU|1|1|C|499
8FRU|1|1|G|500
8FRU|1|1|A|501
8FRU|1|1|G|502
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein uL4
- Chain L
- 60S ribosomal protein eL13
- Chain Q
- 60S ribosomal protein eL18
- Chain a
- 60S ribosomal protein uL15
- Chain b
- 60S ribosomal protein eL29
- Chain i
- 60S ribosomal protein eL36
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