J5_8IP8_003
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAG*CGCAA*UGACGA*UG*UGGAG
- Length
- 22 nucleotides
- Bulged bases
- 8IP8|1|RB|C|722, 8IP8|1|RB|G|723, 8IP8|1|RB|G|787, 8IP8|1|RB|G|788
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|RB|C|679
8IP8|1|RB|G|680
8IP8|1|RB|A|681
8IP8|1|RB|G|682
*
8IP8|1|RB|C|708
8IP8|1|RB|G|709
8IP8|1|RB|C|710
8IP8|1|RB|A|711
8IP8|1|RB|A|712
*
8IP8|1|RB|U|719
8IP8|1|RB|G|720
8IP8|1|RB|A|721
8IP8|1|RB|C|722
8IP8|1|RB|G|723
8IP8|1|RB|A|724
*
8IP8|1|RB|U|752
8IP8|1|RB|G|753
*
8IP8|1|RB|U|786
8IP8|1|RB|G|787
8IP8|1|RB|G|788
8IP8|1|RB|A|789
8IP8|1|RB|G|790
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein eL36
- Chain BA
- 60S ribosomal protein eL21
- Chain EB
- 60S ribosomal protein uL4
- Chain IA
- 60S ribosomal protein uL15
- Chain JA
- 60S ribosomal protein eL18
- Chain KB
- 60S ribosomal protein eL13
- Chain OB
- 60S ribosomal protein eL29
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