J5_8OIR_002
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAGAAAUAAC*GACCC*GUUG*CCAAUC*GAAGAACUAAUG
- Length
- 38 nucleotides
- Bulged bases
- 8OIR|1|B8|A|199, 8OIR|1|B8|G|622, 8OIR|1|B8|U|629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIR|1|B8|C|195
8OIR|1|B8|U|196
8OIR|1|B8|A|197
8OIR|1|B8|G|198
8OIR|1|B8|A|199
8OIR|1|B8|A|200
8OIR|1|B8|A|201
8OIR|1|B8|U|202
8OIR|1|B8|A|203
8OIR|1|B8|A|204
8OIR|1|B8|C|205
*
8OIR|1|B8|G|229
8OIR|1|B8|A|230
8OIR|1|B8|C|231
8OIR|1|B8|C|232
8OIR|1|B8|C|233
*
8OIR|1|B8|G|349
8OIR|1|B8|U|350
8OIR|1|B8|U|351
8OIR|1|B8|G|352
*
8OIR|1|B8|C|601
8OIR|1|B8|C|602
8OIR|1|B8|A|603
8OIR|1|B8|A|604
8OIR|1|B8|U|605
8OIR|1|B8|C|606
*
8OIR|1|B8|G|619
8OIR|1|B8|A|620
8OIR|1|B8|A|621
8OIR|1|B8|G|622
8OIR|1|B8|A|623
8OIR|1|B8|A|624
8OIR|1|B8|C|625
8OIR|1|B8|U|626
8OIR|1|B8|A|627
8OIR|1|B8|A|628
8OIR|1|B8|U|629
8OIR|1|B8|G|630
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BN
- 39S ribosomal protein L4, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Bs
- 39S ribosomal protein L43, mitochondrial
- Chain Bt
- 39S ribosomal protein L44, mitochondrial
- Chain Bx
- 39S ribosomal protein L49, mitochondrial
- Chain Bz
- 39S ribosomal protein L51, mitochondrial
Coloring options: