J5_8OZ0_002
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OZ0|1|W|C|30
8OZ0|1|W|U|31
8OZ0|1|W|U|32
8OZ0|1|W|G|33
8OZ0|1|W|U|34
*
8OZ0|1|W|A|521
8OZ0|1|W|A|522
8OZ0|1|W|A|523
8OZ0|1|W|U|524
8OZ0|1|W|A|525
8OZ0|1|W|A|526
8OZ0|1|W|C|527
*
8OZ0|1|W|G|558
8OZ0|1|W|G|559
8OZ0|1|W|A|560
8OZ0|1|W|A|561
8OZ0|1|W|U|562
8OZ0|1|W|G|563
8OZ0|1|W|A|564
8OZ0|1|W|G|565
*
8OZ0|1|W|C|585
8OZ0|1|W|G|586
8OZ0|1|W|A|587
8OZ0|1|W|G|588
8OZ0|1|W|G|589
8OZ0|1|W|A|590
8OZ0|1|W|U|591
8OZ0|1|W|C|592
8OZ0|1|W|C|593
8OZ0|1|W|A|594
8OZ0|1|W|U|595
*
8OZ0|1|W|A|641
8OZ0|1|W|U|642
8OZ0|1|W|A|643
8OZ0|1|W|OMG|644
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain I
- Eukaryotic translation initiation factor 3 subunit B
- Chain Z
- 40S ribosomal protein S9
- Chain a
- 40S ribosomal protein S23
- Chain b
- 40S ribosomal protein S30
Coloring options: