J5_8OZ0_004
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCGCUC*GGG*UG*CCGAUC*GACGAC
- Length
- 24 nucleotides
- Bulged bases
- 8OZ0|1|W|G|126, 8OZ0|1|W|C|127, 8OZ0|1|W|A|313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OZ0|1|W|G|123
8OZ0|1|W|U|124
8OZ0|1|W|C|125
8OZ0|1|W|G|126
8OZ0|1|W|C|127
8OZ0|1|W|U|128
8OZ0|1|W|C|129
*
8OZ0|1|W|G|183
8OZ0|1|W|G|184
8OZ0|1|W|G|185
*
8OZ0|1|W|U|214
8OZ0|1|W|G|215
*
8OZ0|1|W|C|310
8OZ0|1|W|C|311
8OZ0|1|W|G|312
8OZ0|1|W|A|313
8OZ0|1|W|U|314
8OZ0|1|W|C|315
*
8OZ0|1|W|G|335
8OZ0|1|W|A|336
8OZ0|1|W|C|337
8OZ0|1|W|G|338
8OZ0|1|W|A|339
8OZ0|1|W|C|340
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
- Chain Y
- 40S ribosomal protein S4, X isoform
- Chain d
- 40S ribosomal protein S8
Coloring options: