J5_8P85_002
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GC*GCAGAUC
- Length
- 23 nucleotides
- Bulged bases
- 8P85|1|1|U|1436
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P85|1|1|G|658
8P85|1|1|G|659
8P85|1|1|A|660
8P85|1|1|G|661
8P85|1|1|U|662
8P85|1|1|C|663
*
8P85|1|1|G|799
8P85|1|1|G|800
8P85|1|1|A|801
8P85|1|1|C|802
*
8P85|1|1|G|941
8P85|1|1|U|942
8P85|1|1|U|943
8P85|1|1|C|944
*
8P85|1|1|G|1375
8P85|1|1|C|1376
*
8P85|1|1|G|1431
8P85|1|1|C|1432
8P85|1|1|A|1433
8P85|1|1|G|1434
8P85|1|1|A|1435
8P85|1|1|U|1436
8P85|1|1|C|1437
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AB
- 60S ribosomal protein L28
- Chain AF
- 60S ribosomal protein L32
- Chain l
- 60S ribosomal protein L4-A
- Chain t
- 60S ribosomal protein L13-A
- Chain v
- 60S ribosomal protein L15-A
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