J5_8R3V_010

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R3V|1|A2|C|36
8R3V|1|A2|U|37
8R3V|1|A2|G|38
8R3V|1|A2|G|39
*
8R3V|1|A2|C|403
8R3V|1|A2|G|404
8R3V|1|A2|U|405
8R3V|1|A2|G|406
*
8R3V|1|A2|C|436
8R3V|1|A2|U|437
8R3V|1|A2|U|438
8R3V|1|A2|U|439
8R3V|1|A2|C|440
8R3V|1|A2|A|441
8R3V|1|A2|G|442
*
8R3V|1|A2|C|492
8R3V|1|A2|A|493
8R3V|1|A2|G|494
8R3V|1|A2|A|495
8R3V|1|A2|A|496
8R3V|1|A2|G|497
8R3V|1|A2|A|498
8R3V|1|A2|A|499
8R3V|1|A2|G|500
*
8R3V|1|A2|C|545
8R3V|1|A2|A|546
8R3V|1|A2|A|547
8R3V|1|A2|G|548

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

Small ribosomal subunit protein uS4

Chain L2

Small ribosomal subunit protein uS12