J5_8R55_009
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 8R55|1|X|A|2091, 8R55|1|X|A|2477, 8R55|1|X|U|2478, 8R55|1|X|U|2638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R55|1|X|G|2086
8R55|1|X|A|2087
8R55|1|X|A|2088
8R55|1|X|A|2089
8R55|1|X|G|2090
8R55|1|X|A|2091
8R55|1|X|C|2092
8R55|1|X|C|2093
*
8R55|1|X|G|2475
8R55|1|X|G|2476
8R55|1|X|A|2477
8R55|1|X|U|2478
8R55|1|X|A|2479
8R55|1|X|A|2480
8R55|1|X|C|2481
8R55|1|X|A|2482
*
8R55|1|X|U|2529
8R55|1|X|C|2530
8R55|1|X|G|2531
8R55|1|X|A|2532
8R55|1|X|U|2533
8R55|1|X|G|2534
8R55|1|X|U|2535
8R55|1|X|C|2536
*
8R55|1|X|G|2611
8R55|1|X|G|2612
8R55|1|X|U|2613
8R55|1|X|U|2614
8R55|1|X|C|2615
8R55|1|X|A|2616
8R55|1|X|G|2617
*
8R55|1|X|C|2635
8R55|1|X|G|2636
8R55|1|X|G|2637
8R55|1|X|U|2638
8R55|1|X|C|2639
8R55|1|X|C|2640
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain U
- Transfer RNA; tRNA
- Chain Z
- Large ribosomal subunit protein uL2
- Chain a
- Large ribosomal subunit protein uL3
- Chain b
- Large ribosomal subunit protein uL4
- Chain i
- 50S ribosomal protein L15
- Chain j
- Large ribosomal subunit protein uL16
- Chain u
- Large ribosomal subunit protein bL27
Coloring options: