J5_8V03_001

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

8V03|1|1|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|1|C|47
8V03|1|1|G|48
8V03|1|1|A|49
8V03|1|1|U|50
8V03|1|1|G|51
8V03|1|1|A|52
8V03|1|1|A|53
8V03|1|1|G|54
*
8V03|1|1|C|116
8V03|1|1|G|117
8V03|1|1|A|118
8V03|1|1|A|119
8V03|1|1|U|120
8V03|1|1|G|121
*
8V03|1|1|C|130
8V03|1|1|A|131
*
8V03|1|1|U|148
8V03|1|1|A|149
8V03|1|1|U|150
*
8V03|1|1|A|176
8V03|1|1|G|177
8V03|1|1|G|178

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L34