J5_8VVU_002
3D structure
- PDB id
- 8VVU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GCC*GCAGAUC
- Length
- 24 nucleotides
- Bulged bases
- 8VVU|1|WA|C|2291, 8VVU|1|WA|U|2352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVU|1|WA|G|1337
8VVU|1|WA|G|1338
8VVU|1|WA|A|1339
8VVU|1|WA|G|1340
8VVU|1|WA|U|1341
8VVU|1|WA|C|1342
*
8VVU|1|WA|G|1518
8VVU|1|WA|G|1519
8VVU|1|WA|A|1520
8VVU|1|WA|C|1521
*
8VVU|1|WA|G|1660
8VVU|1|WA|U|1661
8VVU|1|WA|U|1662
8VVU|1|WA|C|1663
*
8VVU|1|WA|G|2290
8VVU|1|WA|C|2291
8VVU|1|WA|C|2292
*
8VVU|1|WA|G|2347
8VVU|1|WA|C|2348
8VVU|1|WA|A|2349
8VVU|1|WA|G|2350
8VVU|1|WA|A|2351
8VVU|1|WA|U|2352
8VVU|1|WA|C|2353
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain DA
- L32
- Chain K
- eL13
- Chain M
- L15
- Chain PA
- L28
- Chain YA
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- L27A
Coloring options: