J5_8WV1_003
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG
- Length
- 33 nucleotides
- Bulged bases
- 8WV1|1|A|U|288, 8WV1|1|A|U|432
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|C|257
8WV1|1|A|U|258
8WV1|1|A|A|259
8WV1|1|A|A|260
8WV1|1|A|A|261
8WV1|1|A|C|262
*
8WV1|1|A|G|282
8WV1|1|A|G|283
8WV1|1|A|G|284
8WV1|1|A|U|285
8WV1|1|A|C|286
8WV1|1|A|G|287
8WV1|1|A|U|288
8WV1|1|A|G|289
*
8WV1|1|A|C|396
8WV1|1|A|G|397
8WV1|1|A|A|398
8WV1|1|A|G|399
8WV1|1|A|U|400
8WV1|1|A|A|401
8WV1|1|A|C|402
*
8WV1|1|A|G|426
8WV1|1|A|G|427
8WV1|1|A|A|428
8WV1|1|A|A|429
8WV1|1|A|U|430
8WV1|1|A|C|431
8WV1|1|A|U|432
8WV1|1|A|G|433
*
8WV1|1|A|U|448
8WV1|1|A|A|449
8WV1|1|A|A|450
8WV1|1|A|G|451
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- Large ribosomal subunit protein bL9
- Chain W
- Large ribosomal subunit protein bL28
Coloring options: