J5_9B0S_010
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 9B0S|1|l8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B0S|1|l5|U|20
9B0S|1|l5|G|21
*
9B0S|1|l8|C|35
9B0S|1|l8|G|36
9B0S|1|l8|A|37
9B0S|1|l8|U|38
9B0S|1|l8|G|39
9B0S|1|l8|A|40
9B0S|1|l8|A|41
9B0S|1|l8|G|42
*
9B0S|1|l8|C|101
9B0S|1|l8|G|102
9B0S|1|l8|A|103
9B0S|1|l8|A|104
9B0S|1|l8|C|105
9B0S|1|l8|G|106
*
9B0S|1|l8|C|113
9B0S|1|l8|G|114
*
9B0S|1|l8|U|136
9B0S|1|l8|A|137
Current chains
- Chain l5
- 28S rRNA [Homo sapiens]
- Chain l8
- 5.8S rRNA [Homo sapiens]
Nearby chains
- Chain lN
- 60S ribosomal protein L15
- Chain lX
- 60S ribosomal protein L23a
- Chain lh
- 60S ribosomal protein L35
- Chain lj
- 60S ribosomal protein L37
- Chain ll
- 60S ribosomal protein L39
Coloring options: