J5_9B24_004
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGUAAAGAGCUCGUAGGUGGUUUGUC*GCAGACUAG*CGCUGAGGAGCGAAAG*CCGUAAACGGUG*CCG
- Length
- 66 nucleotides
- Bulged bases
- 9B24|1|A|A|552, 9B24|1|A|A|556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B24|1|A|C|549
9B24|1|A|G|550
9B24|1|A|U|551
9B24|1|A|A|552
9B24|1|A|A|553
9B24|1|A|A|554
9B24|1|A|G|555
9B24|1|A|A|556
9B24|1|A|G|557
9B24|1|A|C|558
9B24|1|A|U|559
9B24|1|A|C|560
9B24|1|A|G|561
9B24|1|A|U|562
9B24|1|A|A|563
9B24|1|A|G|564
9B24|1|A|G|565
9B24|1|A|U|566
9B24|1|A|G|567
9B24|1|A|G|568
9B24|1|A|U|569
9B24|1|A|U|570
9B24|1|A|U|571
9B24|1|A|G|572
9B24|1|A|U|573
9B24|1|A|C|574
*
9B24|1|A|G|626
9B24|1|A|C|627
9B24|1|A|A|628
9B24|1|A|G|629
9B24|1|A|A|630
9B24|1|A|C|631
9B24|1|A|U|632
9B24|1|A|A|633
9B24|1|A|G|634
*
9B24|1|A|C|734
9B24|1|A|G|735
9B24|1|A|C|736
9B24|1|A|U|737
9B24|1|A|G|738
9B24|1|A|A|739
9B24|1|A|G|740
9B24|1|A|G|741
9B24|1|A|A|742
9B24|1|A|G|743
9B24|1|A|C|744
9B24|1|A|G|745
9B24|1|A|A|746
9B24|1|A|A|747
9B24|1|A|A|748
9B24|1|A|G|749
*
9B24|1|A|C|790
9B24|1|A|C|791
9B24|1|A|G|792
9B24|1|A|U|793
9B24|1|A|A|794
9B24|1|A|A|795
9B24|1|A|A|796
9B24|1|A|C|797
9B24|1|A|G|798
9B24|1|A|G|799
9B24|1|A|U|800
9B24|1|A|G|801
*
9B24|1|A|C|861
9B24|1|A|C|862
9B24|1|A|G|863
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: