J5_9B24_012
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 9B24|1|Y|A|2286, 9B24|1|Y|A|2672, 9B24|1|Y|U|2673, 9B24|1|Y|U|2833, 9B24|1|Y|C|2834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B24|1|Y|A|2281
9B24|1|Y|A|2282
9B24|1|Y|A|2283
9B24|1|Y|A|2284
9B24|1|Y|G|2285
9B24|1|Y|A|2286
9B24|1|Y|C|2287
9B24|1|Y|C|2288
*
9B24|1|Y|G|2670
9B24|1|Y|G|2671
9B24|1|Y|A|2672
9B24|1|Y|U|2673
9B24|1|Y|A|2674
9B24|1|Y|A|2675
9B24|1|Y|C|2676
9B24|1|Y|A|2677
*
9B24|1|Y|U|2724
9B24|1|Y|C|2725
9B24|1|Y|G|2726
9B24|1|Y|A|2727
9B24|1|Y|U|2728
9B24|1|Y|G|2729
9B24|1|Y|U|2730
9B24|1|Y|C|2731
*
9B24|1|Y|G|2806
9B24|1|Y|G|2807
9B24|1|Y|U|2808
9B24|1|Y|U|2809
9B24|1|Y|U|2810
9B24|1|Y|A|2811
9B24|1|Y|G|2812
*
9B24|1|Y|C|2830
9B24|1|Y|G|2831
9B24|1|Y|G|2832
9B24|1|Y|U|2833
9B24|1|Y|C|2834
9B24|1|Y|U|2835
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
- Chain a
- Large ribosomal subunit protein uL3
- Chain b
- Large ribosomal subunit protein uL4
- Chain h
- Large ribosomal subunit protein uL15
- Chain i
- Large ribosomal subunit protein uL16
- Chain o
- Large ribosomal subunit protein uL22
- Chain x
- Large ribosomal subunit protein bL32
Coloring options: