J5_9C3H_001
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CGAUGAAG*CGAACG*CG*UAC*GUG
- Length
- 22 nucleotides
- Bulged bases
- 9C3H|1|L1|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C3H|1|L1|C|35
9C3H|1|L1|G|36
9C3H|1|L1|A|37
9C3H|1|L1|U|38
9C3H|1|L1|G|39
9C3H|1|L1|A|40
9C3H|1|L1|A|41
9C3H|1|L1|G|42
*
9C3H|1|L1|C|101
9C3H|1|L1|G|102
9C3H|1|L1|A|103
9C3H|1|L1|A|104
9C3H|1|L1|C|105
9C3H|1|L1|G|106
*
9C3H|1|L1|C|113
9C3H|1|L1|G|114
*
9C3H|1|L1|U|136
9C3H|1|L1|A|137
9C3H|1|L1|C|138
*
9C3H|1|L5|G|19
9C3H|1|L5|U|20
9C3H|1|L5|G|21
Current chains
- Chain L1
- 5.8S rRNA
- Chain L5
- 28S rRNA
Nearby chains
- Chain LN
- Large ribosomal subunit protein eL15
- Chain LO
- Large ribosomal subunit protein uL29
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Ln
- Large ribosomal subunit protein uL23
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