3D structure

PDB id
9E0N (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. smegmatis unmethylated 70S ribosome structure
Experimental method
ELECTRON MICROSCOPY
Resolution
3.24 Å

Loop

Sequence
CGAG*CGCAG*CGAG*CGUAUC*GUGUAG
Length
25 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9E0N|1|A|C|694
9E0N|1|A|G|695
9E0N|1|A|A|696
9E0N|1|A|G|697
*
9E0N|1|A|C|718
9E0N|1|A|G|719
9E0N|1|A|C|720
9E0N|1|A|A|721
9E0N|1|A|G|722
*
9E0N|1|A|C|729
9E0N|1|A|G|730
9E0N|1|A|A|731
9E0N|1|A|G|732
*
9E0N|1|A|C|744
9E0N|1|A|G|745
9E0N|1|A|U|746
9E0N|1|A|A|747
9E0N|1|A|U|748
9E0N|1|A|C|749
*
9E0N|1|A|G|766
9E0N|1|A|U|767
9E0N|1|A|G|768
9E0N|1|A|U|769
9E0N|1|A|A|770
9E0N|1|A|G|771

Current chains

Chain A
23S rRNA

Nearby chains

Chain 6
Large ribosomal subunit protein bL35
Chain E
Large ribosomal subunit protein uL4
Chain M
Large ribosomal subunit protein uL15

Coloring options:

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