J5_9E0N_006
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GCAAAAUGC*GA*UG*CAAACCAGU*AAC
- Length
- 25 nucleotides
- Bulged bases
- 9E0N|1|A|A|1975, 9E0N|1|A|G|1980
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0N|1|A|G|1892
9E0N|1|A|C|1893
9E0N|1|A|A|1894
9E0N|1|A|A|1895
9E0N|1|A|A|1896
9E0N|1|A|A|1897
9E0N|1|A|U|1898
9E0N|1|A|G|1899
9E0N|1|A|C|1900
*
9E0N|1|A|G|1924
9E0N|1|A|A|1925
*
9E0N|1|A|U|1968
9E0N|1|A|G|1969
*
9E0N|1|A|C|1973
9E0N|1|A|A|1974
9E0N|1|A|A|1975
9E0N|1|A|A|1976
9E0N|1|A|C|1977
9E0N|1|A|C|1978
9E0N|1|A|A|1979
9E0N|1|A|G|1980
9E0N|1|A|U|1981
*
9E0N|1|A|A|2212
9E0N|1|A|A|2213
9E0N|1|A|C|2214
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain L
- Large ribosomal subunit protein uL14
- Chain Q
- Large ribosomal subunit protein bL19
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: