J5_9E0N_009
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- CUGG*CGUG*CUUUC*GAAG*CGAG
- Length
- 21 nucleotides
- Bulged bases
- 9E0N|1|a|U|439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0N|1|a|C|40
9E0N|1|a|U|41
9E0N|1|a|G|42
9E0N|1|a|G|43
*
9E0N|1|a|C|403
9E0N|1|a|G|404
9E0N|1|a|U|405
9E0N|1|a|G|406
*
9E0N|1|a|C|436
9E0N|1|a|U|437
9E0N|1|a|U|438
9E0N|1|a|U|439
9E0N|1|a|C|440
*
9E0N|1|a|G|477
9E0N|1|a|A|478
9E0N|1|a|A|479
9E0N|1|a|G|480
*
9E0N|1|a|C|525
9E0N|1|a|G|526
9E0N|1|a|A|527
9E0N|1|a|G|528
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
- Chain l
- Small ribosomal subunit protein uS12
Coloring options: