J5_9E0P_003
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CCG*CGUGC*GAG*CA*UG
- Length
- 15 nucleotides
- Bulged bases
- 9E0P|1|A|C|619, 9E0P|1|A|U|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0P|1|A|C|618
9E0P|1|A|C|619
9E0P|1|A|G|620
*
9E0P|1|A|C|652
9E0P|1|A|G|653
9E0P|1|A|U|654
9E0P|1|A|G|655
9E0P|1|A|C|656
*
9E0P|1|A|G|669
9E0P|1|A|A|670
9E0P|1|A|G|671
*
9E0P|1|A|C|1376
9E0P|1|A|A|1377
*
9E0P|1|A|U|2241
9E0P|1|A|G|2242
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain E
- Large ribosomal subunit protein uL4
- Chain K
- Large ribosomal subunit protein uL13
- Chain R
- Large ribosomal subunit protein bL20
- Chain S
- Large ribosomal subunit protein bL21
- Chain T
- Large ribosomal subunit protein uL22
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