J5_9E0P_007
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 9E0P|1|A|A|2286, 9E0P|1|A|A|2672, 9E0P|1|A|U|2833, 9E0P|1|A|C|2834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0P|1|A|A|2281
9E0P|1|A|A|2282
9E0P|1|A|A|2283
9E0P|1|A|A|2284
9E0P|1|A|G|2285
9E0P|1|A|A|2286
9E0P|1|A|C|2287
9E0P|1|A|C|2288
*
9E0P|1|A|G|2670
9E0P|1|A|G|2671
9E0P|1|A|A|2672
9E0P|1|A|U|2673
9E0P|1|A|A|2674
9E0P|1|A|A|2675
9E0P|1|A|C|2676
9E0P|1|A|A|2677
*
9E0P|1|A|U|2724
9E0P|1|A|C|2725
9E0P|1|A|G|2726
9E0P|1|A|A|2727
9E0P|1|A|U|2728
9E0P|1|A|G|2729
9E0P|1|A|U|2730
9E0P|1|A|C|2731
*
9E0P|1|A|G|2806
9E0P|1|A|G|2807
9E0P|1|A|U|2808
9E0P|1|A|U|2809
9E0P|1|A|U|2810
9E0P|1|A|A|2811
9E0P|1|A|G|2812
*
9E0P|1|A|C|2830
9E0P|1|A|G|2831
9E0P|1|A|G|2832
9E0P|1|A|U|2833
9E0P|1|A|C|2834
9E0P|1|A|U|2835
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain C
- Large ribosomal subunit protein uL2
- Chain D
- Large ribosomal subunit protein uL3
- Chain E
- Large ribosomal subunit protein uL4
- Chain M
- Large ribosomal subunit protein uL15
- Chain N
- Large ribosomal subunit protein uL16
- Chain T
- Large ribosomal subunit protein uL22
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