J5_9E1S_007
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCU
- Length
- 35 nucleotides
- Bulged bases
- 9E1S|1|I|A|2300, 9E1S|1|I|A|2686, 9E1S|1|I|U|2687, 9E1S|1|I|U|2823, 9E1S|1|I|U|2847
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E1S|1|I|A|2295
9E1S|1|I|A|2296
9E1S|1|I|A|2297
9E1S|1|I|A|2298
9E1S|1|I|G|2299
9E1S|1|I|A|2300
9E1S|1|I|C|2301
9E1S|1|I|C|2302
*
9E1S|1|I|G|2684
9E1S|1|I|G|2685
9E1S|1|I|A|2686
9E1S|1|I|U|2687
9E1S|1|I|A|2688
9E1S|1|I|A|2689
9E1S|1|I|C|2690
9E1S|1|I|A|2691
*
9E1S|1|I|U|2738
9E1S|1|I|C|2739
9E1S|1|I|G|2740
9E1S|1|I|A|2741
9E1S|1|I|U|2742
9E1S|1|I|G|2743
9E1S|1|I|U|2744
*
9E1S|1|I|G|2821
9E1S|1|I|U|2822
9E1S|1|I|U|2823
9E1S|1|I|U|2824
9E1S|1|I|A|2825
9E1S|1|I|G|2826
*
9E1S|1|I|C|2844
9E1S|1|I|G|2845
9E1S|1|I|G|2846
9E1S|1|I|U|2847
9E1S|1|I|C|2848
9E1S|1|I|U|2849
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 1
- Ribosomal tunnel occlusion factor-RTOF
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
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