J5_9F58_001
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAUGAAG*UGAACG*CG*CAU*AGG
- Length
- 22 nucleotides
- Bulged bases
- 9F58|1|4|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F58|1|4|C|35
9F58|1|4|G|36
9F58|1|4|A|37
9F58|1|4|U|38
9F58|1|4|G|39
9F58|1|4|A|40
9F58|1|4|A|41
9F58|1|4|G|42
*
9F58|1|4|U|102
9F58|1|4|G|103
9F58|1|4|A|104
9F58|1|4|A|105
9F58|1|4|C|106
9F58|1|4|G|107
*
9F58|1|4|C|115
9F58|1|4|G|116
*
9F58|1|4|C|137
9F58|1|4|A|138
9F58|1|4|U|139
*
9F58|1|a|A|20
9F58|1|a|G|21
9F58|1|a|G|22
Current chains
- Chain 4
- 5.8S rRNA
- Chain a
- 25S rRNA
Nearby chains
- Chain T
- 60S ribosomal protein L35-A
- Chain V
- 60S ribosomal protein L37-A
- Chain X
- 60S ribosomal protein L39
- Chain o
- 60S ribosomal protein L15-A
- Chain z
- 60S ribosomal protein L25
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