J5_9GHH_002
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCUG*UAAG
- Length
- 33 nucleotides
- Bulged bases
- 9GHH|1|A|U|301, 9GHH|1|A|U|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GHH|1|A|C|271
9GHH|1|A|C|272
9GHH|1|A|A|273
9GHH|1|A|A|274
9GHH|1|A|A|275
9GHH|1|A|C|276
*
9GHH|1|A|G|295
9GHH|1|A|G|296
9GHH|1|A|G|297
9GHH|1|A|U|298
9GHH|1|A|U|299
9GHH|1|A|G|300
9GHH|1|A|U|301
9GHH|1|A|A|302
*
9GHH|1|A|U|415
9GHH|1|A|G|416
9GHH|1|A|A|417
9GHH|1|A|G|418
9GHH|1|A|U|419
9GHH|1|A|A|420
9GHH|1|A|C|421
*
9GHH|1|A|G|445
9GHH|1|A|G|446
9GHH|1|A|A|447
9GHH|1|A|A|448
9GHH|1|A|U|449
9GHH|1|A|C|450
9GHH|1|A|U|451
9GHH|1|A|G|452
*
9GHH|1|A|U|467
9GHH|1|A|A|468
9GHH|1|A|A|469
9GHH|1|A|G|470
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
Coloring options: