J5_9H3G_002
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- GGAGU(OMC)*GGAC*GUUC*GC*GCAGAU(OMC)
- Length
- 23 nucleotides
- Bulged bases
- 9H3G|1|A|U|1445
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3G|1|A|G|670
9H3G|1|A|G|671
9H3G|1|A|A|672
9H3G|1|A|G|673
9H3G|1|A|U|674
9H3G|1|A|OMC|675
*
9H3G|1|A|G|808
9H3G|1|A|G|809
9H3G|1|A|A|810
9H3G|1|A|C|811
*
9H3G|1|A|G|950
9H3G|1|A|U|951
9H3G|1|A|U|952
9H3G|1|A|C|953
*
9H3G|1|A|G|1385
9H3G|1|A|C|1386
*
9H3G|1|A|G|1440
9H3G|1|A|C|1441
9H3G|1|A|A|1442
9H3G|1|A|G|1443
9H3G|1|A|A|1444
9H3G|1|A|U|1445
9H3G|1|A|OMC|1446
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- Large ribosomal subunit protein eL13z
- Chain AQ
- Large ribosomal subunit protein eL28z
- Chain AV
- Large ribosomal subunit protein eL32z
- Chain BT
- Large ribosomal subunit protein uL4z
- Chain Ea
- Large ribosomal subunit protein eL15z
- Chain Ha
- Large ribosomal subunit protein uL15x
Coloring options: