J5_9HA4_001

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAUC*GAGG

Length

24 nucleotides

Bulged bases

9HA4|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA4|1|A|C|47
9HA4|1|A|G|48
9HA4|1|A|A|49
9HA4|1|A|U|50
9HA4|1|A|G|51
9HA4|1|A|A|52
9HA4|1|A|A|53
9HA4|1|A|G|54
*
9HA4|1|A|C|116
9HA4|1|A|G|117
9HA4|1|A|A|118
9HA4|1|A|A|119
9HA4|1|A|U|120
9HA4|1|A|G|121
*
9HA4|1|A|C|130
9HA4|1|A|A|131
*
9HA4|1|A|U|148
9HA4|1|A|A|149
9HA4|1|A|U|150
9HA4|1|A|C|151
*
9HA4|1|A|G|175
9HA4|1|A|A|176
9HA4|1|A|G|177
9HA4|1|A|G|178

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34